datasketches-cpp
Loading...
Searching...
No Matches
quantiles_sketch.hpp
1/*
2 * Licensed to the Apache Software Foundation (ASF) under one
3 * or more contributor license agreements. See the NOTICE file
4 * distributed with this work for additional information
5 * regarding copyright ownership. The ASF licenses this file
6 * to you under the Apache License, Version 2.0 (the
7 * "License"); you may not use this file except in compliance
8 * with the License. You may obtain a copy of the License at
9 *
10 * http://www.apache.org/licenses/LICENSE-2.0
11 *
12 * Unless required by applicable law or agreed to in writing,
13 * software distributed under the License is distributed on an
14 * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
15 * KIND, either express or implied. See the License for the
16 * specific language governing permissions and limitations
17 * under the License.
18 */
19
20#ifndef _QUANTILES_SKETCH_HPP_
21#define _QUANTILES_SKETCH_HPP_
22
23#include <functional>
24#include <memory>
25#include <vector>
26
27#include "quantiles_sorted_view.hpp"
28#include "common_defs.hpp"
29#include "serde.hpp"
30#include "optional.hpp"
31
32namespace datasketches {
33
35namespace quantiles_constants {
37 const uint16_t DEFAULT_K = 128;
39 const uint16_t MIN_K = 2;
41 const uint16_t MAX_K = 1 << 15;
42}
43
150template <typename T,
151 typename Comparator = std::less<T>, // strict weak ordering function (see C++ named requirements: Compare)
152 typename Allocator = std::allocator<T>>
154public:
155 using value_type = T;
156 using allocator_type = Allocator;
157 using comparator = Comparator;
159 using vector_double = typename quantiles_sorted_view<T, Comparator, Allocator>::vector_double;
160
168 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
169
175
179 quantiles_sketch(quantiles_sketch&& other) noexcept;
180
182
189
196
203 template<typename From, typename FC, typename FA>
205 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
206
211 template<typename FwdT>
212 void update(FwdT&& item);
213
218 template<typename FwdSk>
219 void merge(FwdSk&& other);
220
225 bool is_empty() const;
226
231 uint16_t get_k() const;
232
237 uint64_t get_n() const;
238
243 uint32_t get_num_retained() const;
244
249 bool is_estimation_mode() const;
250
256 const T& get_min_item() const;
257
263 const T& get_max_item() const;
264
269 Comparator get_comparator() const;
270
275 allocator_type get_allocator() const;
276
289 quantile_return_type get_quantile(double rank, bool inclusive = true) const;
290
305 double get_rank(const T& item, bool inclusive = true) const;
306
329 vector_double get_PMF(const T* split_points, uint32_t size, bool inclusive = true) const;
330
356 vector_double get_CDF(const T* split_points, uint32_t size, bool inclusive = true) const;
357
364 template<typename SerDe = serde<T>, typename TT = T, typename std::enable_if<std::is_arithmetic<TT>::value, int>::type = 0>
365 size_t get_serialized_size_bytes(const SerDe& sd = SerDe()) const;
366
373 template<typename SerDe = serde<T>, typename TT = T, typename std::enable_if<!std::is_arithmetic<TT>::value, int>::type = 0>
374 size_t get_serialized_size_bytes(const SerDe& sd = SerDe()) const;
375
381 template<typename SerDe = serde<T>>
382 void serialize(std::ostream& os, const SerDe& sd = SerDe()) const;
383
384 // This is a convenience alias for users
385 // The type returned by the following serialize method
386 using vector_bytes = std::vector<uint8_t, typename std::allocator_traits<Allocator>::template rebind_alloc<uint8_t>>;
387
397 template<typename SerDe = serde<T>>
398 vector_bytes serialize(unsigned header_size_bytes = 0, const SerDe& sd = SerDe()) const;
399
408 template<typename SerDe = serde<T>>
409 static quantiles_sketch deserialize(std::istream& is, const SerDe& sd = SerDe(),
410 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
411
421 template<typename SerDe = serde<T>>
422 static quantiles_sketch deserialize(const void* bytes, size_t size, const SerDe& sd = SerDe(),
423 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
424
432 double get_normalized_rank_error(bool is_pmf) const;
433
442 static double get_normalized_rank_error(uint16_t k, bool is_pmf);
443
449 string<Allocator> to_string(bool print_levels = false, bool print_items = false) const;
450
451 class const_iterator;
452
458 const_iterator begin() const;
459
466 const_iterator end() const;
467
473
474private:
475 using Level = std::vector<T, Allocator>;
476 using VectorLevels = std::vector<Level, typename std::allocator_traits<Allocator>::template rebind_alloc<Level>>;
477
478 /* Serialized sketch layout:
479 * Long || Start Byte Addr:
480 * Addr:
481 * || 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 |
482 * 0 || Preamble_Longs | SerVer | FamID | Flags |----- K ---------|---- unused -----|
483 *
484 * || 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 |
485 * 1 ||---------------------------Items Seen Count (N)--------------------------------|
486 *
487 * Long 3 is the start of data, beginning with serialized min and max item, followed by
488 * the sketch data buffers.
489 */
490
491 static const size_t EMPTY_SIZE_BYTES = 8;
492 static const uint8_t SERIAL_VERSION_1 = 1;
493 static const uint8_t SERIAL_VERSION_2 = 2;
494 static const uint8_t SERIAL_VERSION = 3;
495 static const uint8_t FAMILY = 8;
496
497 enum flags { RESERVED0, RESERVED1, IS_EMPTY, IS_COMPACT, IS_SORTED };
498
499 static const uint8_t PREAMBLE_LONGS_SHORT = 1; // for empty
500 static const uint8_t PREAMBLE_LONGS_FULL = 2;
501 static const size_t DATA_START = 16;
502
503 Comparator comparator_;
504 Allocator allocator_;
505 bool is_base_buffer_sorted_;
506 uint16_t k_;
507 uint64_t n_;
508 uint64_t bit_pattern_;
509 Level base_buffer_;
510 VectorLevels levels_;
511 optional<T> min_item_;
512 optional<T> max_item_;
514
515 void setup_sorted_view() const; // modifies mutable state
516 void reset_sorted_view();
517
518 // for deserialization
519 class items_deleter;
520 quantiles_sketch(uint16_t k, uint64_t n, uint64_t bit_pattern,
521 Level&& base_buffer, VectorLevels&& levels,
522 optional<T>&& min_item, optional<T>&& max_item,
523 bool is_sorted, const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
524
525 void grow_base_buffer();
526 void process_full_base_buffer();
527
528 // returns true if size adjusted, else false
529 bool grow_levels_if_needed();
530
531 // buffers should be pre-sized to target capacity as appropriate
532 template<typename FwdV>
533 static void in_place_propagate_carry(uint8_t starting_level, FwdV&& buf_size_k,
534 Level& buf_size_2k, bool apply_as_update,
535 quantiles_sketch& sketch);
536 static void zip_buffer(Level& buf_in, Level& buf_out);
537 static void merge_two_size_k_buffers(Level& arr_in_1, Level& arr_in_2, Level& arr_out, const Comparator& comparator);
538
539 template<typename SerDe>
540 static Level deserialize_array(std::istream& is, uint32_t num_items, uint32_t capcacity, const SerDe& serde, const Allocator& allocator);
541
542 template<typename SerDe>
543 static std::pair<Level, size_t> deserialize_array(const void* bytes, size_t size, uint32_t num_items, uint32_t capcacity, const SerDe& serde, const Allocator& allocator);
544
545 static void check_k(uint16_t k);
546 static void check_serial_version(uint8_t serial_version);
547 static void check_header_validity(uint8_t preamble_longs, uint8_t flags_byte, uint8_t serial_version);
548 static void check_family_id(uint8_t family_id);
549
550 static uint32_t compute_retained_items(uint16_t k, uint64_t n);
551 static uint32_t compute_base_buffer_items(uint16_t k, uint64_t n);
552 static uint64_t compute_bit_pattern(uint16_t k, uint64_t n);
553 static uint32_t count_valid_levels(uint64_t bit_pattern);
554 static uint8_t compute_levels_needed(uint16_t k, uint64_t n);
555
560 template<typename FwdSk>
561 static void standard_merge(quantiles_sketch& tgt, FwdSk&& src);
562
569 template<typename FwdSk>
570 static void downsampling_merge(quantiles_sketch& tgt, FwdSk&& src);
571
572 template<typename FwdV>
573 static void zip_buffer_with_stride(FwdV&& buf_in, Level& buf_out, uint16_t stride);
574
582 static uint8_t lowest_zero_bit_starting_at(uint64_t bits, uint8_t starting_bit);
583
584 template<typename TT = T, typename std::enable_if<std::is_floating_point<TT>::value, int>::type = 0>
585 static inline bool check_update_item(TT item) {
586 return !std::isnan(item);
587 }
588
589 template<typename TT = T, typename std::enable_if<!std::is_floating_point<TT>::value, int>::type = 0>
590 static inline bool check_update_item(TT) {
591 return true;
592 }
593
594 // for type converting constructor
595 template<typename From, typename FC, typename FA> friend class quantiles_sketch;
596};
597
598
599template<typename T, typename C, typename A>
600class quantiles_sketch<T, C, A>::const_iterator {
601public:
602 using iterator_category = std::input_iterator_tag;
603 using value_type = std::pair<const T&, const uint64_t>;
604 using difference_type = void;
605 using pointer = const return_value_holder<value_type>;
606 using reference = const value_type;
607
608 const_iterator& operator++();
609 const_iterator& operator++(int);
610 bool operator==(const const_iterator& other) const;
611 bool operator!=(const const_iterator& other) const;
612 reference operator*() const;
613 pointer operator->() const;
614private:
615 friend class quantiles_sketch<T, C, A>;
616 using Level = std::vector<T, A>;
617 using AllocLevel = typename std::allocator_traits<A>::template rebind_alloc<Level>;
618 Level base_buffer_;
619 std::vector<Level, AllocLevel> levels_;
620 int level_;
621 uint32_t index_;
622 uint32_t bb_count_;
623 uint64_t bit_pattern_;
624 uint64_t weight_;
625 uint16_t k_;
626 const_iterator(const Level& base_buffer, const std::vector<Level, AllocLevel>& levels, uint16_t k, uint64_t n, bool is_end);
627};
628
629} /* namespace datasketches */
630
631#include "quantiles_sketch_impl.hpp"
632
633#endif // _QUANTILES_SKETCH_HPP_
This is a stochastic streaming sketch that enables near-real time analysis of the approximate distrib...
Definition quantiles_sketch.hpp:153
Comparator get_comparator() const
Returns an instance of the comparator for this sketch.
Definition quantiles_sketch_impl.hpp:681
quantiles_sorted_view< T, Comparator, Allocator > get_sorted_view() const
Gets the sorted view of this sketch.
Definition quantiles_sketch_impl.hpp:723
quantiles_sketch(uint16_t k=quantiles_constants::DEFAULT_K, const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
Constructor.
quantiles_sketch & operator=(const quantiles_sketch &other)
Copy assignment.
Definition quantiles_sketch_impl.hpp:89
vector_bytes serialize(unsigned header_size_bytes=0, const SerDe &sd=SerDe()) const
This method serializes the sketch as a vector of bytes.
vector_double get_CDF(const T *split_points, uint32_t size, bool inclusive=true) const
Returns an approximation to the Cumulative Distribution Function (CDF), which is the cumulative analo...
Definition quantiles_sketch_impl.hpp:769
uint32_t get_num_retained() const
Returns the number of retained items (samples) in the sketch.
Definition quantiles_sketch_impl.hpp:664
double get_normalized_rank_error(bool is_pmf) const
Gets the normalized rank error for this sketch.
Definition quantiles_sketch_impl.hpp:711
vector_double get_PMF(const T *split_points, uint32_t size, bool inclusive=true) const
Returns an approximation to the Probability Mass Function (PMF) of the input stream given a set of sp...
Definition quantiles_sketch_impl.hpp:762
void merge(FwdSk &&other)
Merges another sketch into this one.
Definition quantiles_sketch_impl.hpp:235
void update(FwdT &&item)
Updates this sketch with the given data item.
Definition quantiles_sketch_impl.hpp:212
void serialize(std::ostream &os, const SerDe &sd=SerDe()) const
This method serializes the sketch into a given stream in a binary form.
Definition quantiles_sketch_impl.hpp:277
string< Allocator > to_string(bool print_levels=false, bool print_items=false) const
Prints a summary of the sketch.
Definition quantiles_sketch_impl.hpp:595
uint16_t get_k() const
Returns configured parameter k.
Definition quantiles_sketch_impl.hpp:644
bool is_empty() const
Returns true if this sketch is empty.
Definition quantiles_sketch_impl.hpp:654
const T & get_max_item() const
Returns the max item of the stream.
Definition quantiles_sketch_impl.hpp:675
static quantiles_sketch deserialize(std::istream &is, const SerDe &sd=SerDe(), const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
This method deserializes a sketch from a given stream.
double get_rank(const T &item, bool inclusive=true) const
Returns an approximation to the normalized rank of the given item from 0 to 1, inclusive.
Definition quantiles_sketch_impl.hpp:755
static quantiles_sketch deserialize(const void *bytes, size_t size, const SerDe &sd=SerDe(), const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
This method deserializes a sketch from a given array of bytes.
allocator_type get_allocator() const
Returns the allocator for this sketch.
Definition quantiles_sketch_impl.hpp:686
quantile_return_type get_quantile(double rank, bool inclusive=true) const
Returns an approximation to the data item associated with the given rank of a hypothetical sorted ver...
Definition quantiles_sketch_impl.hpp:744
const_iterator begin() const
Iterator pointing to the first item in the sketch.
Definition quantiles_sketch_impl.hpp:866
size_t get_serialized_size_bytes(const SerDe &sd=SerDe()) const
Computes size needed to serialize the current state of the sketch.
Definition quantiles_sketch_impl.hpp:693
bool is_estimation_mode() const
Returns true if this sketch is in estimation mode.
Definition quantiles_sketch_impl.hpp:659
quantiles_sketch(const quantiles_sketch< From, FC, FA > &other, const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
Type converting constructor.
const T & get_min_item() const
Returns the min item of the stream.
Definition quantiles_sketch_impl.hpp:669
const_iterator end() const
Iterator pointing to the past-the-end item in the sketch.
Definition quantiles_sketch_impl.hpp:871
uint64_t get_n() const
Returns the length of the input stream.
Definition quantiles_sketch_impl.hpp:649
Sorted view for quantiles sketches (REQ, KLL and Quantiles)
Definition quantiles_sorted_view.hpp:38
typename std::conditional< std::is_arithmetic< T >::value, T, const T & >::type quantile_return_type
Quantile return type.
Definition quantiles_sorted_view.hpp:93
const uint16_t MAX_K
maximum value of parameter K
Definition quantiles_sketch.hpp:41
const uint16_t MIN_K
minimum value of parameter K
Definition quantiles_sketch.hpp:39
const uint16_t DEFAULT_K
default value of parameter K
Definition quantiles_sketch.hpp:37
DataSketches namespace.
Definition binomial_bounds.hpp:38
Interface for serializing and deserializing items.
Definition serde.hpp:34