datasketches-cpp
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quantiles_sketch.hpp
1/*
2 * Licensed to the Apache Software Foundation (ASF) under one
3 * or more contributor license agreements. See the NOTICE file
4 * distributed with this work for additional information
5 * regarding copyright ownership. The ASF licenses this file
6 * to you under the Apache License, Version 2.0 (the
7 * "License"); you may not use this file except in compliance
8 * with the License. You may obtain a copy of the License at
9 *
10 * http://www.apache.org/licenses/LICENSE-2.0
11 *
12 * Unless required by applicable law or agreed to in writing,
13 * software distributed under the License is distributed on an
14 * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
15 * KIND, either express or implied. See the License for the
16 * specific language governing permissions and limitations
17 * under the License.
18 */
19
20#ifndef _QUANTILES_SKETCH_HPP_
21#define _QUANTILES_SKETCH_HPP_
22
23#include <functional>
24#include <memory>
25#include <vector>
26
27#include "quantiles_sorted_view.hpp"
28#include "common_defs.hpp"
29#include "serde.hpp"
30#include "optional.hpp"
31
32namespace datasketches {
33
35namespace quantiles_constants {
37 const uint16_t DEFAULT_K = 128;
39 const uint16_t MIN_K = 2;
41 const uint16_t MAX_K = 1 << 15;
42}
43
155template <typename T,
156 typename Comparator = std::less<T>, // strict weak ordering function (see C++ named requirements: Compare)
157 typename Allocator = std::allocator<T>>
159public:
160 using value_type = T;
161 using allocator_type = Allocator;
162 using comparator = Comparator;
164 using vector_double = typename quantiles_sorted_view<T, Comparator, Allocator>::vector_double;
165
173 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
174
180
184 quantiles_sketch(quantiles_sketch&& other) noexcept;
185
187
194
201
208 template<typename From, typename FC, typename FA>
210 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
211
218 template<typename FwdT>
219 void update(FwdT&& item);
220
227 template<typename FwdSk>
228 void merge(FwdSk&& other);
229
234 bool is_empty() const;
235
240 uint16_t get_k() const;
241
246 uint64_t get_n() const;
247
252 uint32_t get_num_retained() const;
253
258 bool is_estimation_mode() const;
259
265 const T& get_min_item() const;
266
272 const T& get_max_item() const;
273
278 Comparator get_comparator() const;
279
284 allocator_type get_allocator() const;
285
298 quantile_return_type get_quantile(double rank, bool inclusive = true) const;
299
314 double get_rank(const T& item, bool inclusive = true) const;
315
338 vector_double get_PMF(const T* split_points, uint32_t size, bool inclusive = true) const;
339
365 vector_double get_CDF(const T* split_points, uint32_t size, bool inclusive = true) const;
366
373 template<typename SerDe = serde<T>, typename TT = T, typename std::enable_if<std::is_arithmetic<TT>::value, int>::type = 0>
374 size_t get_serialized_size_bytes(const SerDe& sd = SerDe()) const;
375
382 template<typename SerDe = serde<T>, typename TT = T, typename std::enable_if<!std::is_arithmetic<TT>::value, int>::type = 0>
383 size_t get_serialized_size_bytes(const SerDe& sd = SerDe()) const;
384
390 template<typename SerDe = serde<T>>
391 void serialize(std::ostream& os, const SerDe& sd = SerDe()) const;
392
393 // This is a convenience alias for users
394 // The type returned by the following serialize method
395 using vector_bytes = std::vector<uint8_t, typename std::allocator_traits<Allocator>::template rebind_alloc<uint8_t>>;
396
406 template<typename SerDe = serde<T>>
407 vector_bytes serialize(unsigned header_size_bytes = 0, const SerDe& sd = SerDe()) const;
408
417 template<typename SerDe = serde<T>>
418 static quantiles_sketch deserialize(std::istream& is, const SerDe& sd = SerDe(),
419 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
420
430 template<typename SerDe = serde<T>>
431 static quantiles_sketch deserialize(const void* bytes, size_t size, const SerDe& sd = SerDe(),
432 const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
433
441 double get_normalized_rank_error(bool is_pmf) const;
442
451 static double get_normalized_rank_error(uint16_t k, bool is_pmf);
452
458 string<Allocator> to_string(bool print_levels = false, bool print_items = false) const;
459
460 class const_iterator;
461
467 const_iterator begin() const;
468
475 const_iterator end() const;
476
482
483private:
484 using Level = std::vector<T, Allocator>;
485 using VectorLevels = std::vector<Level, typename std::allocator_traits<Allocator>::template rebind_alloc<Level>>;
486
487 /* Serialized sketch layout:
488 * Long || Start Byte Addr:
489 * Addr:
490 * || 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 |
491 * 0 || Preamble_Longs | SerVer | FamID | Flags |----- K ---------|---- unused -----|
492 *
493 * || 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 |
494 * 1 ||---------------------------Items Seen Count (N)--------------------------------|
495 *
496 * Long 3 is the start of data, beginning with serialized min and max item, followed by
497 * the sketch data buffers.
498 */
499
500 static const size_t EMPTY_SIZE_BYTES = 8;
501 static const uint8_t SERIAL_VERSION_1 = 1;
502 static const uint8_t SERIAL_VERSION_2 = 2;
503 static const uint8_t SERIAL_VERSION = 3;
504 static const uint8_t FAMILY = 8;
505
506 enum flags { RESERVED0, RESERVED1, IS_EMPTY, IS_COMPACT, IS_SORTED };
507
508 static const uint8_t PREAMBLE_LONGS_SHORT = 1; // for empty
509 static const uint8_t PREAMBLE_LONGS_FULL = 2;
510 static const size_t DATA_START = 16;
511
512 Comparator comparator_;
513 Allocator allocator_;
514 bool is_base_buffer_sorted_;
515 uint16_t k_;
516 uint64_t n_;
517 uint64_t bit_pattern_;
518 Level base_buffer_;
519 VectorLevels levels_;
520 optional<T> min_item_;
521 optional<T> max_item_;
523
524 void setup_sorted_view() const; // modifies mutable state
525 void reset_sorted_view();
526
527 // for deserialization
528 class items_deleter;
529 quantiles_sketch(uint16_t k, uint64_t n, uint64_t bit_pattern,
530 Level&& base_buffer, VectorLevels&& levels,
531 optional<T>&& min_item, optional<T>&& max_item,
532 bool is_sorted, const Comparator& comparator = Comparator(), const Allocator& allocator = Allocator());
533
534 void grow_base_buffer();
535 void process_full_base_buffer();
536
537 // returns true if size adjusted, else false
538 bool grow_levels_if_needed();
539
540 // buffers should be pre-sized to target capacity as appropriate
541 template<typename FwdV>
542 static void in_place_propagate_carry(uint8_t starting_level, FwdV&& buf_size_k,
543 Level& buf_size_2k, bool apply_as_update,
544 quantiles_sketch& sketch);
545 static void zip_buffer(Level& buf_in, Level& buf_out);
546 static void merge_two_size_k_buffers(Level& arr_in_1, Level& arr_in_2, Level& arr_out, const Comparator& comparator);
547
548 template<typename SerDe>
549 static Level deserialize_array(std::istream& is, uint32_t num_items, uint32_t capacity, const SerDe& serde, const Allocator& allocator);
550
551 template<typename SerDe>
552 static std::pair<Level, size_t> deserialize_array(const void* bytes, size_t size, uint32_t num_items, uint32_t capacity, const SerDe& serde, const Allocator& allocator);
553
554 static void check_k(uint16_t k);
555 static void check_serial_version(uint8_t serial_version);
556 static void check_header_validity(uint8_t preamble_longs, uint8_t flags_byte, uint8_t serial_version);
557 static void check_family_id(uint8_t family_id);
558
559 static uint32_t compute_retained_items(uint16_t k, uint64_t n);
560 static uint32_t compute_base_buffer_items(uint16_t k, uint64_t n);
561 static uint64_t compute_bit_pattern(uint16_t k, uint64_t n);
562 static uint32_t count_valid_levels(uint64_t bit_pattern);
563 static uint8_t compute_levels_needed(uint16_t k, uint64_t n);
564
569 template<typename FwdSk>
570 static void standard_merge(quantiles_sketch& tgt, FwdSk&& src);
571
578 template<typename FwdSk>
579 static void downsampling_merge(quantiles_sketch& tgt, FwdSk&& src);
580
581 template<typename FwdV>
582 static void zip_buffer_with_stride(FwdV&& buf_in, Level& buf_out, uint16_t stride);
583
591 static uint8_t lowest_zero_bit_starting_at(uint64_t bits, uint8_t starting_bit);
592
593 template<typename TT = T, typename std::enable_if<std::is_floating_point<TT>::value, int>::type = 0>
594 static inline bool check_update_item(TT item) {
595 return !std::isnan(item);
596 }
597
598 template<typename TT = T, typename std::enable_if<!std::is_floating_point<TT>::value, int>::type = 0>
599 static inline bool check_update_item(TT) {
600 return true;
601 }
602
603 // for type converting constructor
604 template<typename From, typename FC, typename FA> friend class quantiles_sketch;
605};
606
607
608template<typename T, typename C, typename A>
609class quantiles_sketch<T, C, A>::const_iterator {
610public:
611 using iterator_category = std::input_iterator_tag;
612 using value_type = std::pair<const T&, const uint64_t>;
613 using difference_type = void;
614 using pointer = const return_value_holder<value_type>;
615 using reference = const value_type;
616
617 const_iterator& operator++();
618 const_iterator& operator++(int);
619 bool operator==(const const_iterator& other) const;
620 bool operator!=(const const_iterator& other) const;
621 reference operator*() const;
622 pointer operator->() const;
623private:
624 friend class quantiles_sketch<T, C, A>;
625 using Level = std::vector<T, A>;
626 using AllocLevel = typename std::allocator_traits<A>::template rebind_alloc<Level>;
627 Level base_buffer_;
628 std::vector<Level, AllocLevel> levels_;
629 int level_;
630 uint32_t index_;
631 uint32_t bb_count_;
632 uint64_t bit_pattern_;
633 uint64_t weight_;
634 uint16_t k_;
635 const_iterator(const Level& base_buffer, const std::vector<Level, AllocLevel>& levels, uint16_t k, uint64_t n, bool is_end);
636};
637
638} /* namespace datasketches */
639
640#include "quantiles_sketch_impl.hpp"
641
642#endif // _QUANTILES_SKETCH_HPP_
This is a stochastic streaming sketch that enables near-real time analysis of the approximate distrib...
Definition quantiles_sketch.hpp:158
Comparator get_comparator() const
Returns an instance of the comparator for this sketch.
Definition quantiles_sketch_impl.hpp:690
quantiles_sorted_view< T, Comparator, Allocator > get_sorted_view() const
Gets the sorted view of this sketch.
Definition quantiles_sketch_impl.hpp:732
quantiles_sketch(uint16_t k=quantiles_constants::DEFAULT_K, const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
Constructor.
quantiles_sketch & operator=(const quantiles_sketch &other)
Copy assignment.
Definition quantiles_sketch_impl.hpp:90
vector_bytes serialize(unsigned header_size_bytes=0, const SerDe &sd=SerDe()) const
This method serializes the sketch as a vector of bytes.
vector_double get_CDF(const T *split_points, uint32_t size, bool inclusive=true) const
Returns an approximation to the Cumulative Distribution Function (CDF), which is the cumulative analo...
Definition quantiles_sketch_impl.hpp:778
uint32_t get_num_retained() const
Returns the number of retained items (samples) in the sketch.
Definition quantiles_sketch_impl.hpp:673
double get_normalized_rank_error(bool is_pmf) const
Gets the normalized rank error for this sketch.
Definition quantiles_sketch_impl.hpp:720
vector_double get_PMF(const T *split_points, uint32_t size, bool inclusive=true) const
Returns an approximation to the Probability Mass Function (PMF) of the input stream given a set of sp...
Definition quantiles_sketch_impl.hpp:771
void merge(FwdSk &&other)
Merges another sketch into this one.
Definition quantiles_sketch_impl.hpp:236
void update(FwdT &&item)
Updates this sketch with the given data item.
Definition quantiles_sketch_impl.hpp:213
void serialize(std::ostream &os, const SerDe &sd=SerDe()) const
This method serializes the sketch into a given stream in a binary form.
Definition quantiles_sketch_impl.hpp:278
string< Allocator > to_string(bool print_levels=false, bool print_items=false) const
Prints a summary of the sketch.
Definition quantiles_sketch_impl.hpp:604
uint16_t get_k() const
Returns configured parameter k.
Definition quantiles_sketch_impl.hpp:653
bool is_empty() const
Returns true if this sketch is empty.
Definition quantiles_sketch_impl.hpp:663
const T & get_max_item() const
Returns the max item of the stream.
Definition quantiles_sketch_impl.hpp:684
static quantiles_sketch deserialize(std::istream &is, const SerDe &sd=SerDe(), const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
This method deserializes a sketch from a given stream.
double get_rank(const T &item, bool inclusive=true) const
Returns an approximation to the normalized rank of the given item from 0 to 1, inclusive.
Definition quantiles_sketch_impl.hpp:764
static quantiles_sketch deserialize(const void *bytes, size_t size, const SerDe &sd=SerDe(), const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
This method deserializes a sketch from a given array of bytes.
allocator_type get_allocator() const
Returns the allocator for this sketch.
Definition quantiles_sketch_impl.hpp:695
quantile_return_type get_quantile(double rank, bool inclusive=true) const
Returns an approximation to the data item associated with the given rank of a hypothetical sorted ver...
Definition quantiles_sketch_impl.hpp:753
const_iterator begin() const
Iterator pointing to the first item in the sketch.
Definition quantiles_sketch_impl.hpp:875
size_t get_serialized_size_bytes(const SerDe &sd=SerDe()) const
Computes size needed to serialize the current state of the sketch.
Definition quantiles_sketch_impl.hpp:702
bool is_estimation_mode() const
Returns true if this sketch is in estimation mode.
Definition quantiles_sketch_impl.hpp:668
quantiles_sketch(const quantiles_sketch< From, FC, FA > &other, const Comparator &comparator=Comparator(), const Allocator &allocator=Allocator())
Type converting constructor.
const T & get_min_item() const
Returns the min item of the stream.
Definition quantiles_sketch_impl.hpp:678
const_iterator end() const
Iterator pointing to the past-the-end item in the sketch.
Definition quantiles_sketch_impl.hpp:880
uint64_t get_n() const
Returns the length of the input stream.
Definition quantiles_sketch_impl.hpp:658
Sorted view for quantiles sketches (REQ, KLL and Quantiles)
Definition quantiles_sorted_view.hpp:38
typename std::conditional< std::is_arithmetic< T >::value, T, const T & >::type quantile_return_type
Quantile return type.
Definition quantiles_sorted_view.hpp:93
const uint16_t MAX_K
maximum value of parameter K
Definition quantiles_sketch.hpp:41
const uint16_t MIN_K
minimum value of parameter K
Definition quantiles_sketch.hpp:39
const uint16_t DEFAULT_K
default value of parameter K
Definition quantiles_sketch.hpp:37
DataSketches namespace.
Definition binomial_bounds.hpp:38
Interface for serializing and deserializing items.
Definition serde.hpp:34